Nocturnal changes in leaf growth of Populus deltoides are controlled by cytoplasmic growth.
Identifieur interne : 003D63 ( Main/Exploration ); précédent : 003D62; suivant : 003D64Nocturnal changes in leaf growth of Populus deltoides are controlled by cytoplasmic growth.
Auteurs : Shizue Matsubara [Allemagne] ; Vaughan Hurry ; Nathalie Druart ; Catherine Benedict ; Ingar Janzik ; Andrés Chavarría-Krauser ; Achim Walter ; Ulrich SchurrSource :
- Planta [ 0032-0935 ] ; 2006.
Descripteurs français
- KwdFr :
- Analyse de profil d'expression de gènes (MeSH), Analyse de regroupements (MeSH), Cytoplasme (physiologie), Feuilles de plante (croissance et développement), Feuilles de plante (cytologie), Gènes de plante (MeSH), Histone (génétique), Histone (métabolisme), Métabolisme glucidique (MeSH), Obscurité (MeSH), Populus (croissance et développement), Populus (cytologie), Protéines ribosomiques (génétique), Protéines ribosomiques (métabolisme), Protéines végétales (génétique), Protéines végétales (métabolisme), Rythme circadien (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Séquençage par oligonucléotides en batterie (MeSH).
- MESH :
- croissance et développement : Feuilles de plante, Populus.
- cytologie : Feuilles de plante, Populus.
- génétique : Histone, Protéines ribosomiques, Protéines végétales.
- métabolisme : Histone, Protéines ribosomiques, Protéines végétales.
- physiologie : Cytoplasme.
- Analyse de profil d'expression de gènes, Analyse de regroupements, Gènes de plante, Métabolisme glucidique, Obscurité, Rythme circadien, Régulation de l'expression des gènes végétaux, Séquençage par oligonucléotides en batterie.
English descriptors
- KwdEn :
- Carbohydrate Metabolism (MeSH), Circadian Rhythm (MeSH), Cluster Analysis (MeSH), Cytoplasm (physiology), Darkness (MeSH), Gene Expression Profiling (MeSH), Gene Expression Regulation, Plant (MeSH), Genes, Plant (MeSH), Histones (genetics), Histones (metabolism), Oligonucleotide Array Sequence Analysis (MeSH), Plant Leaves (cytology), Plant Leaves (growth & development), Plant Proteins (genetics), Plant Proteins (metabolism), Populus (cytology), Populus (growth & development), Ribosomal Proteins (genetics), Ribosomal Proteins (metabolism).
- MESH :
- chemical , genetics : Histones, Plant Proteins, Ribosomal Proteins.
- chemical , metabolism : Histones, Plant Proteins, Ribosomal Proteins.
- cytology : Plant Leaves, Populus.
- growth & development : Plant Leaves, Populus.
- physiology : Cytoplasm.
- Carbohydrate Metabolism, Circadian Rhythm, Cluster Analysis, Darkness, Gene Expression Profiling, Gene Expression Regulation, Plant, Genes, Plant, Oligonucleotide Array Sequence Analysis.
Abstract
Growing leaves do not expand at a constant rate but exhibit pronounced diel growth rhythms. However, the mechanisms giving rise to distinct diel growth dynamics in different species are still largely unknown. As a first step towards identifying genes controlling rate and timing of leaf growth, we analysed the transcriptomes of rapidly expanding and fully expanded leaves of Populus deltoides Bartr. ex. Marsh at points of high and low expansion at night. Tissues with well defined temporal growth rates were harvested using an online growth-monitoring system based on a digital image sequence processing method developed for quantitative mapping of dicot leaf growth. Unlike plants studied previously, leaf growth in P. deltoides was characterised by lack of a base-tip gradient across the lamina, and by maximal and minimal growth at dusk and dawn, respectively. Microarray analysis revealed that the nocturnal decline in growth coincided with a concerted down-regulation of ribosomal protein genes, indicating deceleration of cytoplasmic growth. In a subsequent time-course experiment, Northern blotting and real-time RT-PCR confirmed that the ribosomal protein gene RPL12 and a cell-cycle gene H2B were down-regulated after midnight following a decrease in cellular carbohydrate concentrations. Thus, we propose that the spatio-temporal growth pattern in leaves of P. deltoides primarily arises from cytoplasmic growth whose activity increases from afternoon to midnight and thereafter decreases in this species.
DOI: 10.1007/s00425-005-0181-0
PubMed: 16333638
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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However, the mechanisms giving rise to distinct diel growth dynamics in different species are still largely unknown. As a first step towards identifying genes controlling rate and timing of leaf growth, we analysed the transcriptomes of rapidly expanding and fully expanded leaves of Populus deltoides Bartr. ex. Marsh at points of high and low expansion at night. Tissues with well defined temporal growth rates were harvested using an online growth-monitoring system based on a digital image sequence processing method developed for quantitative mapping of dicot leaf growth. Unlike plants studied previously, leaf growth in P. deltoides was characterised by lack of a base-tip gradient across the lamina, and by maximal and minimal growth at dusk and dawn, respectively. Microarray analysis revealed that the nocturnal decline in growth coincided with a concerted down-regulation of ribosomal protein genes, indicating deceleration of cytoplasmic growth. In a subsequent time-course experiment, Northern blotting and real-time RT-PCR confirmed that the ribosomal protein gene RPL12 and a cell-cycle gene H2B were down-regulated after midnight following a decrease in cellular carbohydrate concentrations. Thus, we propose that the spatio-temporal growth pattern in leaves of P. deltoides primarily arises from cytoplasmic growth whose activity increases from afternoon to midnight and thereafter decreases in this species.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">16333638</PMID><DateCompleted><Year>2006</Year><Month>07</Month><Day>24</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0032-0935</ISSN><JournalIssue CitedMedium="Print"><Volume>223</Volume><Issue>6</Issue><PubDate><Year>2006</Year><Month>May</Month></PubDate></JournalIssue><Title>Planta</Title><ISOAbbreviation>Planta</ISOAbbreviation></Journal><ArticleTitle>Nocturnal changes in leaf growth of Populus deltoides are controlled by cytoplasmic growth.</ArticleTitle><Pagination><MedlinePgn>1315-28</MedlinePgn></Pagination><Abstract><AbstractText>Growing leaves do not expand at a constant rate but exhibit pronounced diel growth rhythms. However, the mechanisms giving rise to distinct diel growth dynamics in different species are still largely unknown. As a first step towards identifying genes controlling rate and timing of leaf growth, we analysed the transcriptomes of rapidly expanding and fully expanded leaves of Populus deltoides Bartr. ex. Marsh at points of high and low expansion at night. Tissues with well defined temporal growth rates were harvested using an online growth-monitoring system based on a digital image sequence processing method developed for quantitative mapping of dicot leaf growth. Unlike plants studied previously, leaf growth in P. deltoides was characterised by lack of a base-tip gradient across the lamina, and by maximal and minimal growth at dusk and dawn, respectively. Microarray analysis revealed that the nocturnal decline in growth coincided with a concerted down-regulation of ribosomal protein genes, indicating deceleration of cytoplasmic growth. In a subsequent time-course experiment, Northern blotting and real-time RT-PCR confirmed that the ribosomal protein gene RPL12 and a cell-cycle gene H2B were down-regulated after midnight following a decrease in cellular carbohydrate concentrations. Thus, we propose that the spatio-temporal growth pattern in leaves of P. deltoides primarily arises from cytoplasmic growth whose activity increases from afternoon to midnight and thereafter decreases in this species.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Matsubara</LastName><ForeName>Shizue</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Institut for Chemistry and Dynamics of the Geosphere: Phytosphere (ICG-III), Research Centre Jülich, 52425 Jülich, Germany. s.matsubara@fz-juelich.de</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hurry</LastName><ForeName>Vaughan</ForeName><Initials>V</Initials></Author><Author ValidYN="Y"><LastName>Druart</LastName><ForeName>Nathalie</ForeName><Initials>N</Initials></Author><Author ValidYN="Y"><LastName>Benedict</LastName><ForeName>Catherine</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Janzik</LastName><ForeName>Ingar</ForeName><Initials>I</Initials></Author><Author ValidYN="Y"><LastName>Chavarría-Krauser</LastName><ForeName>Andrés</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Walter</LastName><ForeName>Achim</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Schurr</LastName><ForeName>Ulrich</ForeName><Initials>U</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2005</Year><Month>12</Month><Day>07</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>Planta</MedlineTA><NlmUniqueID>1250576</NlmUniqueID><ISSNLinking>0032-0935</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D006657">Histones</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012269">Ribosomal Proteins</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D050260" MajorTopicYN="N">Carbohydrate Metabolism</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002940" MajorTopicYN="Y">Circadian Rhythm</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016000" MajorTopicYN="N">Cluster Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003593" MajorTopicYN="N">Cytoplasm</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D003624" MajorTopicYN="Y">Darkness</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020869" MajorTopicYN="N">Gene Expression Profiling</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006657" MajorTopicYN="N">Histones</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020411" MajorTopicYN="N">Oligonucleotide Array Sequence Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName><QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012269" MajorTopicYN="N">Ribosomal Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2005</Year><Month>08</Month><Day>03</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2005</Year><Month>10</Month><Day>18</Day></PubMedPubDate><PubMedPubDate 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last="Hurry">Vaughan Hurry</name><name sortKey="Janzik, Ingar" sort="Janzik, Ingar" uniqKey="Janzik I" first="Ingar" last="Janzik">Ingar Janzik</name><name sortKey="Schurr, Ulrich" sort="Schurr, Ulrich" uniqKey="Schurr U" first="Ulrich" last="Schurr">Ulrich Schurr</name><name sortKey="Walter, Achim" sort="Walter, Achim" uniqKey="Walter A" first="Achim" last="Walter">Achim Walter</name></noCountry><country name="Allemagne"><region name="Rhénanie-du-Nord-Westphalie"><name sortKey="Matsubara, Shizue" sort="Matsubara, Shizue" uniqKey="Matsubara S" first="Shizue" last="Matsubara">Shizue Matsubara</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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